Protein: | PPR79_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 471 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPR79_ARATH.
Description | E-value | Query Range |
Subject Range |
|
422.0 | [0..5] | [470..117] |
|
408.0 | [0..3] | [469..181] |
Region A: Residues: [1-77] |
1 11 21 31 41 51 | | | | | | 1 MSAVKSVSSF RLASLLRREN DPSAAMKLFR NPDPESTNPK RPFRYSLLCY DIIITKLGGS 60 61 KMFDELDQVL LHLKTDT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [78-471] |
1 11 21 31 41 51 | | | | | | 1 RIVPTEIIFC NVINFFGRGK LPSRALHMFD EMPQYRCQRT VKSLNSLLSA LLKCGELEKM 60 61 KERLSSIDEF GKPDACTYNI LIHGCSQSGC FDDALKLFDE MVKKKVKPTG VTFGTLIHGL 120 121 CKDSRVKEAL KMKHDMLKVY GVRPTVHIYA SLIKALCQIG ELSFAFKLKD EAYEGKIKVD 180 181 AAIYSTLISS LIKAGRSNEV SMILEEMSEK GCKPDTVTYN VLINGFCVEN DSESANRVLD 240 241 EMVEKGLKPD VISYNMILGV FFRIKKWEEA TYLFEDMPRR GCSPDTLSYR IVFDGLCEGL 300 301 QFEEAAVILD EMLFKGYKPR RDRLEGFLQK LCESGKLEIL SKVISSLHRG IAGDADVWSV 360 361 MIPTMCKEPV ISDSIDLLLN TVKEDGPLSA MPQC |
Detection Method: | |
Confidence: | 41.39794 |
Match: | 1w3bA |
Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |