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View Structure Prediction Details

Protein: LAC9_ARATH
Organism: Arabidopsis thaliana
Length: 586 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAC9_ARATH.

Description E-value Query
Range
Subject
Range
LAC8_ARATH - Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1
493.0 [0..1] [586..1]

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Predicted Domain #1
Region A:
Residues: [1-586]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRVHHSLSN QAFLVLLLFS SIASAAIVEH VLHVKDVVVT PLCKEQMIPI VNGSLPGPTI  60
   61 NVREGDTLVV HVINKSTYNV TIHWHGVFQL KSVWMDGANM ITQCPIQPSN NFTYQFDITG 120
  121 QEGTLLWHAH VVNLRATIHG ALIIRPRSGR PYPFPKPYKE VPLIFQQWWD TDVRLLELRP 180
  181 APVSDAYLIN GLAGDSYPCS KNRMFNLKVV QGKTYLLRII NAALNTHLFF KIANHNVTVV 240
  241 AVDAVYTTPY LTDVMILTPG QTIDAILTAD QPIGTYYMAI IPYFSAIGVP ASPDTKPTRG 300
  301 LIVYEGATSS SSPTKPWMPP ANDIPTAHRF SSNITSLVGG PHWTPVPRHV DEKMFITMGL 360
  361 GLDPCPSNAK CVGPLDQRLA GSLNNRTFMI PERISMQEAY FYNITGVYTD DFPDQPPLKF 420
  421 DFTKFEQHPT NSDMEMMFPE RKTSVKTIRF NSTVEIVLQN TGILTPESHP MHLHGFNFYV 480
  481 LGYGFGNYDP IRDARKLNLF NPQMHNTVGV PPGGWVVLRF IANNPGIWLF HCHMDAHLPL 540
  541 GIMMAFIVQN GPTRETSLPS PPSNLPQCTR DPTIYDSRTT NVDMSY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.39794
Match: 1aozA
Description: Ascorbate oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrogen ion transmembrane transporter activity 5.98463819317772 bayes_pls_golite062009
cation transmembrane transporter activity 4.80679334235027 bayes_pls_golite062009
ion transmembrane transporter activity 4.70382790500795 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 4.35501871300326 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 4.30470923318097 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 3.4840258390283 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 2.9428517783106 bayes_pls_golite062009
metal ion transmembrane transporter activity 2.82570802206273 bayes_pls_golite062009
transporter activity 2.75690053147562 bayes_pls_golite062009
transmembrane transporter activity 2.67027550825653 bayes_pls_golite062009
substrate-specific transporter activity 2.42871678736924 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 1.88441243755534 bayes_pls_golite062009
copper ion binding 1.67952903413921 bayes_pls_golite062009
oxidoreductase activity 1.49034416929059 bayes_pls_golite062009
iron ion transmembrane transporter activity 1.17954317549442 bayes_pls_golite062009
copper ion transmembrane transporter activity 0.96418286916503 bayes_pls_golite062009
ferroxidase activity 0.948067553932463 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions, oxygen as acceptor 0.948067553932463 bayes_pls_golite062009
binding 0.89678532754402 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions 0.84656625234389 bayes_pls_golite062009
transition metal ion binding 0.530231637345107 bayes_pls_golite062009
catalytic activity 0.363071622766357 bayes_pls_golite062009
active transmembrane transporter activity 0.269767937058687 bayes_pls_golite062009
heme-copper terminal oxidase activity 0.233785530643069 bayes_pls_golite062009
cytochrome-c oxidase activity 0.0760986706873972 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors, oxygen as acceptor 0.0760986706873972 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors 0.0760986706873972 bayes_pls_golite062009
protein binding 0.0393017564630179 bayes_pls_golite062009
primary active transmembrane transporter activity 0.0246677473353576 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle