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View Structure Prediction Details

Protein: LAC17_ARATH
Organism: Arabidopsis thaliana
Length: 577 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAC17_ARATH.

Description E-value Query
Range
Subject
Range
gi|19571025, gi|... - gi|34908196|ref|NP_915445.1| putative laccase [Oryza sativa (japonica cultivar-group)], gi|215694814...
441.0 [0..3] [577..8]

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Predicted Domain #1
Region A:
Residues: [1-577]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQLLLAVF SCVLLLPQPA FGITRHYTLE IKMQNVTRLC HTKSLVSVNG QFPGPKLIAR  60
   61 EGDQVLIKVV NQVPNNISLH WHGIRQLRSG WADGPAYITQ CPIQTGQSYV YNYTIVGQRG 120
  121 TLWYHAHISW LRSTVYGPLI ILPKRGVPYP FAKPHKEVPM IFGEWFNADT EAIIRQATQT 180
  181 GGGPNVSDAY TINGLPGPLY NCSAKDTFRL RVKPGKTYLL RLINAALNDE LFFSIANHTV 240
  241 TVVEADAIYV KPFETETILI APGQTTNVLL KTKSSYPSAS FFMTARPYVT GQGTFDNSTV 300
  301 AGILEYEPPK QTKGAHSRTS IKNLQLFKPI LPALNDTNFA TKFSNKLRSL NSKNFPANVP 360
  361 LNVDRKFFFT VGLGTNPCNH KNNQTCQGPT NTTMFAASIS NISFTMPTKA LLQSHYSGQS 420
  421 HGVYSPKFPW SPIVPFNYTG TPPNNTMVSN GTNLMVLPYN TSVELVMQDT SILGAESHPL 480
  481 HLHGFNFFVV GQGFGNFDPN KDPRNFNLVD PIERNTVGVP SGGWAAIRFL ADNPGVWFMH 540
  541 CHLEVHTSWG LRMAWLVLDG DKPDQKLLPP PADLPKC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.522879
Match: 1aozA
Description: Ascorbate oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrogen ion transmembrane transporter activity 6.66354146106487 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 4.86417846685632 bayes_pls_golite062009
cation transmembrane transporter activity 4.85872378524044 bayes_pls_golite062009
ion transmembrane transporter activity 4.83377537341486 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 4.66193431249175 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 4.18036443727889 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 4.11692911500018 bayes_pls_golite062009
transporter activity 3.19308963442841 bayes_pls_golite062009
transmembrane transporter activity 3.00719579355004 bayes_pls_golite062009
substrate-specific transporter activity 2.81821270952204 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 2.49123749292703 bayes_pls_golite062009
active transmembrane transporter activity 2.10862095701488 bayes_pls_golite062009
primary active transmembrane transporter activity 1.9851494986709 bayes_pls_golite062009
metal ion transmembrane transporter activity 1.65566057418201 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions 1.55524630095061 bayes_pls_golite062009
copper ion binding 1.28102950881153 bayes_pls_golite062009
iron ion transmembrane transporter activity 1.17954317549442 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions, oxygen as acceptor 0.76206075753137 bayes_pls_golite062009
ferroxidase activity 0.76206075753137 bayes_pls_golite062009
binding 0.686229070803119 bayes_pls_golite062009
heme-copper terminal oxidase activity 0.379596275876029 bayes_pls_golite062009
catalytic activity 0.363071622766357 bayes_pls_golite062009
oxidoreductase activity 0.358771187940097 bayes_pls_golite062009
transition metal ion binding 0.342547544679237 bayes_pls_golite062009
cytochrome-c oxidase activity 0.222255654263847 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors, oxygen as acceptor 0.222255654263847 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors 0.222255654263847 bayes_pls_golite062009
copper ion transmembrane transporter activity 0.133057759698602 bayes_pls_golite062009
protein binding 0.0393017564630179 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle