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View Structure Prediction Details

Protein: gi|3757529, gi|1...
Organism: Arabidopsis thaliana
Length: 414 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3757529, gi|1....

Description E-value Query
Range
Subject
Range
gi|110827356, gi... - gi|111615223|ref|ZP_01402289.1| Sugar phosphate permease-like [Verminephrobacter eiseniae EF01-2], g...
167.0 [0..16] [388..302]

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Predicted Domain #1
Region A:
Residues: [1-414]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEYRLGELR HLLTTVFLSG FSEFLVKPVM TDVTVAAVCS GLNETCSLAV YLTGVEQVTV  60
   61 GLGTMVMMPV IGNLSDRYGI KTLLTLPMCL SILPPAILAY RRDTNFFYAF YITKILFDMA 120
  121 KNVCGRKRIS MFGVLAGVRS ISGVCATFSA RLLPIASIFQ VAAISFFFGL VYMRVFLKER 180
  181 LHDDDEDDCD EDDNTSGRNH HDGGDLTMLA EPILRDAPTK IHIVLNTKYS SLKDMYFLKA 240
  241 RFGFNKNDFA ELILLVTIIG SISQLFILPK LVSAIGERRV LSTGLLMDSV NAACLSVSWS 300
  301 AWVPYATTVL VPVTMFVMPS VCGIASRQVG PGEQGKVQGC ISGVKSFSGV VAPFIYSPLT 360
  361 ALFLSEKAPF YFPGFSLLCV TFSLMIGFFL SLLIRDVPSP SMNKAINNIS REEA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle