| Protein: | gi|110742199, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 201 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110742199, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
222.0 | [0..1] | [190..1] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MAMMLLQIPP SSSLLNTRNL QIRFFHSSVS ASSKKFRCRA VREKAEDIDK NISPPSSSPP 60
61 PPSAEEVTKK YGLEVGLWKI LSSKDDEG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.639 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.517 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.492 | a.112.1 | Description not found. |
| View | Download | 0.450 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.444 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
|
Region A: Residues: [89-201] |
1 11 21 31 41 51
| | | | | |
1 SDGDNKKKKS KTDEAKELLA KYGGAYLATS ITLSLISFSL CYVLVTSGVD VQALLLKVGI 60
61 STNETGEKVG AFALAYAAHK AASPIRFPPT VALTPIVANW IGKKVDKEKD DDK
|
| Detection Method: | |
| Confidence: | 57.408935 |
| Match: | PF06916.4 |
| Description: | No description for PF06916.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.670 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.604 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.589 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.588 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.502 | N/A | N/A | a.29.2 | Bromodomain |
