| Protein: | RHD32_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 834 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RHD32_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
477.0 | [0..5] | [788..2] |
|
Region A: Residues: [1-556] |
1 11 21 31 41 51
| | | | | |
1 MGENDDGCST QLIDGNGEFN VKGLDNFVKK TKLSDCGLSY AVVAIMGPQS SGKSTLLNHL 60
61 FKTSFREMDA FAGRSQTTKG IWMARCVGIE PFTIAMDLEG TDGRERGEDD TTFEKQSALF 120
121 AIAVADIVLI NMWCHDIGRE QAANKPLLKT VFQVMLRLFS PRKTTLLFVI RDKTKTPIEL 180
181 LERALREDIQ KIWDSVRKPE AHKNTPLNEF FNVMIVALSS YEEKEKQFEQ EVAELRQRFF 240
241 HSISPGGLAG DRRGVVPASG FSFSSQQIWK VIKENRDLDL PAHKVMVATV RCEEIANEKL 300
301 RDLATNESWL ELHEAAEGGL VPGFGKKLSS ILEKYFSEYD AEAIYFDEGV RKEKRLQLKL 360
361 NALDFVYPSY ATMLGHLRSN ALESFKIRLE QSLNQGEGFA KAVRDSQQSC LMVFDKGCED 420
421 AAVKQATWDA SKIREKLCRD IDAHTFFARS AKLSELTANY EKRLTQALSE PVESLFEAGG 480
481 KETWPSIRKL LKRETETAVT DFLDVVTGFE LDHAKIDAMV QNLKNYSQSL VEKKAREEAA 540
541 KILIRMKDRF STVFSH
|
| Detection Method: |  |
| Confidence: | 41.0 |
| Match: | 1dg3A |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 3.10463051760206 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.95886887664984 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.74389108884083 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.67097555143215 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.65161658635465 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.64849912301318 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 2.50494515048649 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 2.39629638016861 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 2.39600931083427 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.36051733655256 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 2.35906629925754 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 2.35679406876731 | bayes_pls_golite062009 |
| ATPase activity | 2.2625504298178 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.24901251684901 | bayes_pls_golite062009 |
| binding | 2.00548409930693 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.65609907941094 | bayes_pls_golite062009 |
| hydrolase activity | 1.34710139310747 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.3182108176243 | bayes_pls_golite062009 |
| nucleic acid binding | 1.24151268097078 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| DNA binding | 0.829652732561224 | bayes_pls_golite062009 |
| GTPase activity | 0.768815888267067 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.704934361725919 | bayes_pls_golite062009 |
| transcription regulator activity | 0.648798858522413 | bayes_pls_golite062009 |
| ATP binding | 0.41092997612902 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.396187998943318 | bayes_pls_golite062009 |
| drug transmembrane transporter activity | 0.38711726712063 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.385813421701492 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.377870145186619 | bayes_pls_golite062009 |
| translation regulator activity | 0.29096092258568 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.282397764628576 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.274994961137851 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
|
Region A: Residues: [557-676] |
1 11 21 31 41 51
| | | | | |
1 DKDSMPRVWT GKEDIRAITK DARAEALSLL SVMTAIRLDE RPDNIESTLF SSLMDGTVSA 60
61 ASSHNRSVGT STDPLASSSW EEVPPNNILL TPVQCKSLWR QFKSETEYTV TQAISAQEAH 120
121
|
| Detection Method: | |
| Confidence: | 14.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [677-834] |
1 11 21 31 41 51
| | | | | |
1 KRNNNWLPPA WAIVLMIVLG FNEFMMLLKN PLYLLGFFVA FLLSKALWVQ LDIPREFQHG 60
61 AVAGVLSITS KFLPTVMNLL RKLAEEAQGK TTQEVPDLSA SQTYRQQSPS HSISSTISES 120
121 VASNISSAGD DAEYSSPSPA LVRRRNTNNV QESEISQM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
