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View Structure Prediction Details

Protein: gi|4662644, gi|1...
Organism: Arabidopsis thaliana
Length: 695 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4662644, gi|1....

Description E-value Query
Range
Subject
Range
gi|79554506 - gi|79554506|ref|NP_178872.2| ATMAK10; acetyltransferase [Arabidopsis thaliana]
791.0 [0..1] [695..1]

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Predicted Domain #1
Region A:
Residues: [1-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSVREDEDS SSPIHHDSKT SSSIPSGDNN SVWADVSPLL SAACSDLQEG ELINGDNFNL  60
   61 FAAMSALEIM DPKMDSGMVS TFYSIDEAIE SGFAPVPISS DSTVNVQSII DIMDHLLACE 120
  121 ATWHMGHSLA QTVFSCIYVL RPERTSSQAL LHSYCRVIRA TCRAVVSVVS DARTNEEEDL 180
  181 FTMTYGLPFS GEEDAKGLLL LNAVEETICR QLRACKATRR RMLEDAELEP LQSNPHLEES 240
  241 FCKSLLCRIR FRKHFLHALN CMRRPQGRGL ELARKHIGYC ISELDSVLDS AEFLRLD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 118.065502
Match: PF04112.4
Description: No description for PF04112.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [298-487]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IFENGVNEIE ESTTASGRSP IGFDPTLNKR LSAPTPPRAI KLLSWKKAID YYVKLLHNLD  60
   61 KICAFSLEPD LEAVLEFVIQ FQKSRPDLVA RAHLQLLLVQ DGKLYGRDTF LTICARSLAL 120
  121 DVSKNHGLHT NEYILQLNQM GIAVGQMMQQ DTSRSSKNGD KSLLILNHIY GGLEEQINWV 180
  181 AIRFLMLGFD 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [488-695]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDLYSPSEYC MVYWYMYIIL WKLAERARFR VLIVVNTEER KAKRNKEYSR DMAREDRISL  60
   61 WVLFLKCQTC LAQGLTVMIA ALRNEGMSLK SQGPFNTENE KFIQHFELLQ KASLPEYDAY 120
  121 ESFSKSTSHA RLDYLPMYEY FHDAQKIAKD IKVGYANDPD KLAEVTGLEK VAERNIVAVN 180
  181 LFCQDRSLKV SFEFTHHPYF ATAVVRRS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle