YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|6899885, gi|1...
Organism: Arabidopsis thaliana
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6899885, gi|1....

Description E-value Query
Range
Subject
Range
gi|42572761 - gi|42572761|ref|NP_974476.1| unknown protein [Arabidopsis thaliana]
361.0 [0..1] [221..1]

Back

Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTLHCLST LHLLPRTHHP KTLNSLKPIT TKSQPCKTPE IPSTPNALQL LKSSSLPLAV  60
   61 IALPFFLDPQ DAAAAGGEFG ILEGRSFALI HPIVMGGLFA YTLWTGYLGW QWRRVRTIQS 120
  121 EISDLKKQLK PTPVSPDGST AVDSSSPPST TELQIQRLTE ERKELVKGSY R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [172-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKHFDAGSVL LGFGVLEAVF GGVNTYLRTG KLFPGPHLYA GAGITVLWAA AAALVPAMQK  60
   61 GNDTARSLHI ALNAVNVLLF IWQIPTGLDI VLKVFEFTKW P

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle