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View Structure Prediction Details

Protein: gi|4512704, gi|1...
Organism: Arabidopsis thaliana
Length: 430 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4512704, gi|1....

Description E-value Query
Range
Subject
Range
gi|92878639 - gi|92878639|gb|ABE85158.1| hypothetical protein MtrDRAFT_AC119415g5v1 [Medicago truncatula]
209.0 [0..36] [181..3]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSGNHVDIV DVSSGEEDVD TRGDVEYTDW LNGVMEPVDD TSDSTDIVEV LSEVRGGVNS  60
   61 QYRKPNSSNQ ALEDDDDCVI LDCDPDKTRE TTSVDDDDDD DVLVVGQKGE IACRDFPHPR 120
  121 HSCAKYAFNS TSHEKYCDMC HCYVCDIRAP CPYWCIAVSS IDHCHANDKE KIWKNQREYF 180
  181 RTGYMPTAPS S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [192-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPTPSILRVP KNTLLRKNHV EIRPCSSSTR VANPSSVKAR HRIRQPIPHN QGLQSQPAQS  60
   61 LSTVRDSVIQ KDRSSYRFSL RSRVASSAGN GISIRFNNAQ VSQSSHHSSS TVAPTLNPET 120
  121 YTQQRNVRDH CTALPGSQSN VFTRHADQNI RGSGNRQFQT NVDRFAPSKA PLTAEDSHTA 180
  181 TVQQQPGINE NVLETKLSEF EKWLMENPNP TGPVSPLPEP GNQDYASTLS FDFETFLND

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle