| Protein: | gi|19423948, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 806 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19423948, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
1183.0 | [0..1] | [805..1] |
|
Region A: Residues: [1-554] |
1 11 21 31 41 51
| | | | | |
1 MHSIKLVLLV LLIISFHSQT VSKHHPTIDG LLDRLDSLLP TSSVQESAAK GLLQRLLPTH 60
61 SQSFELRIIS KDACGGTSCF VIENYDGPGR IGPEILIKGT TGVEIASGLH WYLKYKCNAH 120
121 VSWDKTGGIQ VASVPQPGHL PRIDSKRIFI RRPVPWNYYQ NVVTSSYSYV WWGWERWERE 180
181 IDWMALQGIN LPLAFTGQEA IWQKVFKRFN ISKEDLDDYF GGPAFLAWAR MGNLHAWGGP 240
241 LSKNWLDDQL LLQKQILSRM LKFGMTPVLP SFSGNVPSAL RKIYPEANIT RLDNWNTVDG 300
301 DSRWCCTYLL NPSDPLFIEI GEAFIKQQTE EYGEITNIYN CDTFNENTPP TSEPEYISSL 360
361 GAAVYKAMSK GNKNAVWLMQ GWLFSSDSKF WKPPQLKALL HSVPFGKMIV LDLYAEVKPI 420
421 WNKSAQFYGT PYIWCMLHNF GGNIEMYGAL DSISSGPVDA RVSKNSTMVG VGMCMEGIEQ 480
481 NPVVYELTSE MAFRDEKVDV QKWLKSYARR RYMKENHQIE AAWEILYHTV YNCTDGIADH 540
541 NTDFIVKLPD WDPS
|
| Detection Method: |  |
| Confidence: | 1.06 |
| Match: | 1hp4A |
| Description: | beta-N-acetylhexosaminidase; beta-N-acetylhexosaminidase, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 5.71939076824857 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 5.38641758111429 | bayes_pls_golite062009 |
| hydrolase activity | 3.72668885527791 | bayes_pls_golite062009 |
| hexosaminidase activity | 2.73191740978141 | bayes_pls_golite062009 |
| beta-N-acetylhexosaminidase activity | 2.21994577489795 | bayes_pls_golite062009 |
| hyalurononglucosaminidase activity | 1.89966340463997 | bayes_pls_golite062009 |
| catalytic activity | 1.71182498300466 | bayes_pls_golite062009 |
| glucosidase activity | 1.36330009153408 | bayes_pls_golite062009 |
| galactosidase activity | 0.826553661006998 | bayes_pls_golite062009 |
| alpha-glucosidase activity | 0.531211764315521 | bayes_pls_golite062009 |
| binding | 0.441428889607177 | bayes_pls_golite062009 |
| mannosidase activity | 0.282303153047451 | bayes_pls_golite062009 |
| beta-glucuronidase activity | 0.134820195771769 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 0.0442793643840943 | bayes_pls_golite062009 |
|
Region A: Residues: [555-806] |
1 11 21 31 41 51
| | | | | |
1 SSVQDDLKQK DSYMISTGPY ETKRRVLFQD KTADLPKAHL WYSTKEVIQA LKLFLEAGDD 60
61 LSRSLTYRYD MVDLTRQVLS KLANQVYTEA VTAFVKKDIG SLGQLSEKFL ELIKDMDVLL 120
121 ASDDNCLLGT WLESAKKLAK NGDERKQYEW NARTQVTMWY DSNDVNQSKL HDYANKFWSG 180
181 LLEDYYLPRA RLYFNEMLKS LRDKKIFKVE KWRREWIMMS HKWQQSSSEV YPVKAKGDAL 240
241 AISRHLLSKY FP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
