| Protein: | gi|15237977, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 735 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15237977, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
654.0 | [0..78] | [637..1] |
|
Region A: Residues: [1-545] |
1 11 21 31 41 51
| | | | | |
1 MRRSFSVLGP YKWLKPSSTY TNVYCFVTNP PLISNPNNGS AIFRYLSYFA PQQRRQQQQA 60
61 PDPDDPANLL KEDGVSLCSQ MWLENFKEPD KTATNLTSYL RRFELWVLAY QKVCCDELGA 120
121 YVPRSSIQRS ALENLLALRN SVLDDRFKWG SRLDFYIKSP RDKTDYESLS KRKIKAILTT 180
181 TQPTPFQDRI VQEVLLMILE PIYESRFSQK SFAFRPGRTA HTVLRVIRRN FAGYLWYVKG 240
241 DLSVVLDGMK VGFVISSLMR DVRDKKVIDL IKSALVTPVV TSKVEDGEKK KTKKRKYQKK 300
301 RVLAEDEPKP DPYWLETFFG FAPEEAGKSP QWGHCGILSP LLVNVCLDEL DRWMETKVKD 360
361 FYRPSKSDVI WNNPEGEADQ GNTSWPEFVP TSGPDKTRKM DYVRYGGHIL IGVRGPRADA 420
421 ATLRKELIEF VDQKYMLRLD NENLPIEHIT KGIMFLDHVL CRRVVYPTLR YTATGGKIIS 480
481 EKGVGTLLSV TASLKQCIKQ FRKLLFIKGD RDPDPQPCFR MFHATQAHTN NQMNKFLTTI 540
541 AEWYR
|
| Detection Method: |  |
| Confidence: | 1.8 |
| Match: | 1xr7A |
| Description: | Crystal structure of RNA-dependent RNA Polymerase 3D from human rhinovirus serotype 16 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.455736130840876 | bayes_pls_golite062009 |
| transferase activity | 0.1348265745695 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0290819848545603 | bayes_pls_golite062009 |
|
Region A: Residues: [546-640] |
1 11 21 31 41 51
| | | | | |
1 FADNRKKIVN FCSYIIRGSL AKLYAAKYKL RSRAKVYKFA NRNLSLPLLQ KKGQSPEYQN 60
61 LLRMGLAESV DGLVYTRMSL VPETDYSPFP GNWRP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [641-735] |
1 11 21 31 41 51
| | | | | |
1 EHEKFLIEYL TLDEPKTLEE QKRFIREKGL VSPQDYTSML VWNYKRNAIP MDQVSILKDQ 60
61 PFLLGSSSTY NRDNDDQKNK EEDEDSEDGL RIARM
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
