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View Structure Prediction Details

Protein: gi|15239524, gi|...
Organism: Arabidopsis thaliana
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15239524, gi|....

Description E-value Query
Range
Subject
Range
gi|115440855, gi... - gi|56202311|dbj|BAD73770.1| putative anthocyanidin synthase [Oryza sativa Japonica Group], gi|222619...
gi|218189317 - gi|218189317|gb|EEC71744.1| hypothetical protein OsI_04312 [Oryza sativa Indica Group]
353.0 [0..3] [348..9]

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Predicted Domain #1
Region A:
Residues: [1-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKPKLKTVQ EVVAAGEKLP ERYLYTPTGD GEGDQPFNGL LPEMKISIID LNLLFSSSDD  60
   61 GREELSKLHS AISTWGVVQV MNHGISEALL DKIHELTKQF FVLPTKEKQK YAREISSFQG 120
  121 FGNDMILSDD QVLDWVDRLY LITYPEDQRQ LKFWPENPSG FRETLHEYTM KQQLVVEKFF 180
  181 KALARSLELE DNCFLEMHGE NATLETRFNI YPPCPRPDKV LGLKPHSDGS AFTLILPDKN 240
  241 VEGLQFLKDG KWYKASILPH TILINVGDTM EVMSNGIYKS PVHRVVLNGK KERIYVATFC 300
  301 NADEDKEIQP LNGLVSEARP RLYKAVKKSE KNFFDYYQQG RRPIEAAMI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.522879
Match: 2brtA
Description: No description for 2brtA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.588242505102319 bayes_pls_golite062009
nucleic acid binding 0.0678642854814351 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle