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View Structure Prediction Details

Protein: gi|3511223, gi|9...
Organism: Arabidopsis thaliana
Length: 356 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3511223, gi|9....

Description E-value Query
Range
Subject
Range
gi|21593435, gi|... - gi|21593435|gb|AAM65402.1| putative plant adhesion molecule [Arabidopsis thaliana], gi|18396196|ref|...
295.0 [0..1] [349..1]

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Predicted Domain #1
Region A:
Residues: [1-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERKRTKDSE PGPVPLLVPV DRFGFLKQEH GSSPQRFTKT KSSINYEKEE KRVTKWRKMI  60
   61 GTGGSDWKHY VRRKPHVVKR RIRKGIPDCL RGLVWQLISG SRDLLLMNPG VYVQLVIYET 120
  121 SASELDIIRD ISRTFPSHVF FQKRHGPGQR SLYNVLKAYS VYDRDVGYVQ GMGFIAGLLL 180
  181 LYMSEEDAFW LLVALLKGAV HSPIEGLYQA GLPLVQQYLL QFDQLVRELM PKLGEHFTQE 240
  241 MINPSMYASQ WFITVFSYSL PFHSALRIWD VFLAEGVKIV FKVGLALLKH CHDDLLKLPF 300
  301 EELMHALRNF PEDAMDPDTL LPLAYSIKVS KRLEEMKQDC DKAVAKPTQT AKSVRQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.39794
Match: 2qq8A
Description: No description for 2qq8A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle