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View Structure Prediction Details

Protein: DSEL_ARATH
Organism: Arabidopsis thaliana
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DSEL_ARATH.

Description E-value Query
Range
Subject
Range
PLA15_ARATH - Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana GN=At1g06800 PE=1 SV=2
360.0 [0..1] [409..72]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKKKEEEE EKLIVTREFA KRWRDLSGQN HWKGMLQPLD QDLREYIIHY GEMAQAGYDT  60
   61 FNINTESQFA GAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [74-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IYSRKDFFAK VGLEIAHPYT KYKVTKFIYA TSDIHVPESF LLFPISREGW SKESNWMGYV  60
   61 AVTDDQGTAL LGRRDIVVSW RGSVQPLEWV EDFEFGLVNA IKIFGERNDQ VQIHQGWYSI 120
  121 YMSQDERSPF TKTNARDQVL REVGRLLEKY KDEEVSITIC GHSLGAALAT LSATDIVANG 180
  181 YNRPKSRPDK SCPVTAFVFA SPRVGDSDFR KLFSGLEDIR VLRTRNLPDV IPIYPPIGYS 240
  241 EVGDEFPIDT RKSPYMKSPG NLATFHCLEG YLHGVAGTQG TNKADLFRLD VERAIGLVNK 300
  301 SVDGLKDECM VPGKWRVLKN KGMAQQDDGS WELVDHEIDD NEDLDF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.0
Match: 1dt3A
Description: Triacylglycerol lipase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle