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View Structure Prediction Details

Protein: gi|15229058, gi|...
Organism: Arabidopsis thaliana
Length: 469 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15229058, gi|....

Description E-value Query
Range
Subject
Range
gi|23296346, gi|... - pir||T05388 hypothetical protein F16G20.200 - Arabidopsis thaliana, gi|7269198|emb|CAB79305.1| puta...
351.0 [0..35] [468..58]

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Predicted Domain #1
Region A:
Residues: [1-469]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRPTFGLLV FLAIFLFPAI ESRSHRNSVT SKIEFSALNC RKHSAILTDF GAVGDGKTSN  60
   61 TKAFRNAISK LSQMATDGGA QLVVPPGKWL TGSFNLTSHF TLFIQRGATI LASQDESEWP 120
  121 VIAPLPSYGK GRDGTGTGRF NSLISGTNLT DVVITGNNGT INGQGQYWWD KFKKKQFKIT 180
  181 RPYLIEILFS KNIQISNITL IDSPSWNIHP VYCNSVIVKS VTVLAPVTVP NTDGINPDSC 240
  241 TNTLIEDCYI VSGDDCIAVK SGWDQYGIKF GMPTQQLSIR RLTCISPKSA GVALGSEMSG 300
  301 GIKDVRIEDV TLTNTESAIR IKTAVGRGAY VKDIYARRIT MKTMKYVFWM SGNYGSHPDE 360
  361 GFDPKALPEI TNINYRDMTA ENVTMSASLD GIDKDPFTGI CISNVTIALA AKAKKMQWNC 420
  421 TDVAGVTSRV TPEPCSLLPE KKAQAKNVDC AFPSDLIPIE SVVLKKCFL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.522879
Match: 2uveA
Description: No description for 2uveA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle