| Protein: | gi|110742187, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 1019 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110742187, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..147] | [944..1] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MAGQNPNMDQ FEAYFKRADL DGDGRISGAE AVGFFQGSGL SKQVLAQIWS LSDRSHSGFL 60
61 DRQNFYNSLR LVTVAQSKRD
|
| Detection Method: |  |
| Confidence: | 20.69897 |
| Match: | 1eh2A |
| Description: | STRUCTURE OF THE SECOND EPS15 HOMOLOGY DOMAIN OF HUMAN EPS15, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.482343911625985 | bayes_pls_golite062009 |
|
Region A: Residues: [81-304] |
1 11 21 31 41 51
| | | | | |
1 LTPEIVNAAL NTPAAAKIPP PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY 60
61 FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP 120
121 GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF 180
181 QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF SMLP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [305-483] |
1 11 21 31 41 51
| | | | | |
1 SGNQLQQPRP AASSQPAVSS QGPSSGLPPG SAVGSGHSTP AGNNQPPWPK MKPSDVQKYT 60
61 KVFMEVDSDK DGKITGEQAR NLFLSWRLPR EVLKHVWELS DQDNDTMLSL REFCISLYLM 120
121 ERYREGRPLP TALPSSIMFD ETLLSISGAP SHGYANAGWG SGQGFVQQPG MGARPITPT
|
| Detection Method: | |
| Confidence: | 38.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [484-825] |
1 11 21 31 41 51
| | | | | |
1 TGMRPPVPAP GPQPGSGIPP NQPRNQAPVL DAPFANHLGN GYSASSNLPE AAADEEKVDE 60
61 KQNAYMDSRE KLDYYRTKMQ DIVLYKSRCD NRLNEISERA SADKREAETL AKKYEEKYKQ 120
121 VAEIGSKLTI EEARFREIEG RKMELSQAIV NMEQGGSADG LLQVRADRIQ SDLEELMKAL 180
181 TERCKKHGLE VNSKALVDLP AGWQPGIQEG AALWDEEWDK FEDEGFGNEI TFDKSKEQNS 240
241 SGEKENGTVD DGSGPPDSPT HVEDNYGPFS ETSDRHHESE YGTTHSEDRS PRDSPVSRNA 300
301 TEVPSPDYSQ GKNSEFFDDS NWASAFDTND DVDSVWGFDA SK
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 2p01A |
| Description: | No description for 2p01A was found. |
|
Region A: Residues: [826-1019] |
1 11 21 31 41 51
| | | | | |
1 SQDGDYFGSG DDFGGNTARA DSPSSRSFGA QRKSQFAFDD SVPSTPLSRF GNSPPRFSDA 60
61 SARDNNFDSF SRFDSFNTSE AGAGFSSQPE RLSRFDSINS SKDFGGAAFS RFDSINSSRD 120
121 VTGAEKFSRF DSINSSKDFG GPSLSRFDSM NSTKDFSGSH GYSFDDADPF GSTGPFKVSS 180
181 DESPTKRSDN WNSF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
