Protein: | Y1668_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 685 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1668_ARATH.
Description | E-value | Query Range |
Subject Range |
|
362.0 | [0..12] | [681..310] |
Region A: Residues: [1-280] |
1 11 21 31 41 51 | | | | | | 1 MSQLFLILCF ILTHFFAIAT SLNDQGLALL SFKQSIQNQS DSVFTNWNSS DSNPCSWQGV 60 61 TCNYDMRVVS IRLPNKRLSG SLDPSIGSLL SLRHINLRDN DFQGKLPVEL FGLKGLQSLV 120 121 LSGNSFSGFV PEEIGSLKSL MTLDLSENSF NGSISLSLIP CKKLKTLVLS KNSFSGDLPT 180 181 GLGSNLVHLR TLNLSFNRLT GTIPEDVGSL ENLKGTLDLS HNFFSGMIPT SLGNLPELLY 240 241 VDLSYNNLSG PIPKFNVLLN AGPNAFQGNP FLCGLPIKIS |
Detection Method: | ![]() |
Confidence: | 11.30103 |
Match: | 1ogqA |
Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
receptor activity | 3.26307298864411 | bayes_pls_golite062009 |
transmembrane receptor activity | 3.15814977487775 | bayes_pls_golite062009 |
molecular transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
signal transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
G-protein coupled receptor activity | 2.38174370875276 | bayes_pls_golite062009 |
protein kinase activity | 1.61450095469422 | bayes_pls_golite062009 |
transmembrane receptor protein kinase activity | 1.50579173120225 | bayes_pls_golite062009 |
binding | 1.44369481405695 | bayes_pls_golite062009 |
transmembrane receptor protein tyrosine kinase activity | 1.36671598599873 | bayes_pls_golite062009 |
kinase activity | 1.28067810202729 | bayes_pls_golite062009 |
actin binding | 1.21726363067325 | bayes_pls_golite062009 |
cytoskeletal protein binding | 1.17332908979699 | bayes_pls_golite062009 |
phosphotransferase activity, alcohol group as acceptor | 1.05564877695171 | bayes_pls_golite062009 |
transferase activity, transferring phosphorus-containing groups | 0.950165801339728 | bayes_pls_golite062009 |
protein binding | 0.646159692466759 | bayes_pls_golite062009 |
structural molecule activity | 0.611417906910562 | bayes_pls_golite062009 |
receptor binding | 0.596307412859703 | bayes_pls_golite062009 |
transferase activity | 0.435331931559158 | bayes_pls_golite062009 |
epidermal growth factor receptor binding | 0.430075899423884 | bayes_pls_golite062009 |
protein-hormone receptor activity | 0.42902267001067 | bayes_pls_golite062009 |
protein tyrosine kinase activity | 0.231213253402712 | bayes_pls_golite062009 |
actin filament binding | 0.142821832073786 | bayes_pls_golite062009 |
growth factor binding | 0.0358215683345522 | bayes_pls_golite062009 |
Region A: Residues: [281-371] |
1 11 21 31 41 51 | | | | | | 1 CSTRNTQVVP SQLYTRRANH HSRLCIILTA TGGTVAGIIF LASLFIYYLR KASARANKDQ 60 61 NNRTCHINEK LKKTTKPEFL CFKTGNSESE T |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [372-685] |
1 11 21 31 41 51 | | | | | | 1 LDENKNQQVF MPMDPEIEFD LDQLLKASAF LLGKSRIGLV YKVVLENGLM LAVRRLEDKG 60 61 WLRLKEFLAD VEAMAKIKHP NVLNLKACCW SPEEKLLIYD YIPNGDLGSA IQGRPGSVSC 120 121 KQLTWTVRLK ILRGIAKGLT YIHEFSPKRY VHGHINTSNI LLGPNLEPKV SGFGLGRIVD 180 181 TSSDIRSDQI SPMETSSPIL SRESYYQAPE AASKMTKPSQ KWDVYSFGLV ILEMVTGKSP 240 241 VSSEMDLVMW VESASERNKP AWYVLDPVLA RDRDLEDSMV QVIKIGLACV QKNPDKRPHM 300 301 RSVLESFEKL VTSI |
Detection Method: | ![]() |
Confidence: | 60.154902 |
Match: | 2qkwB |
Description: | No description for 2qkwB was found. |