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View Structure Prediction Details

Protein: FAH2_ARATH
Organism: Arabidopsis thaliana
Length: 237 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FAH2_ARATH.

Description E-value Query
Range
Subject
Range
gi|159131702 - gi|159131702|gb|EDP56815.1| fatty acid hydroxylase, putative [Aspergillus fumigatus A1163]
gi|70996386, gi|... - gi|70996386|ref|XP_752948.1| fatty acid hydroxylase [Aspergillus fumigatus Af293], gi|66850583|gb|EA...
247.0 [0..6] [235..272]

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Predicted Domain #1
Region A:
Residues: [1-63]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAERYTVDL NKPLVFQVGH LGEEYQEWIH QPIVCVEGPR FFESDFWEFL TRTVWWAIPT  60
   61 IWL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.278 N/A N/A a.5.7 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain
View Download 0.269 N/A N/A a.46.2 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
View Download 0.259 N/A N/A a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.242 N/A N/A a.46.2 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
View Download 0.211 N/A N/A a.46.2 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain

Predicted Domain #2
Region A:
Residues: [64-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVVCYVLSIS ASKGLTFPQI GLIVAFGVLT WTLLEYTLHR FLFHIQTKSY WANTAHYLLH  60
   61 GCHHKHPQDG LRLVFPPTAT AILLVPLWKL LHLLATPATA PAILGGILFG YVMYDITHYY 120
  121 LHHGQPKEPT FKHLKKYHLN HHFRIQDKGY GITSSLWDKV FGTLPGIKAA AKKS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 16.522879
Match: PF04116.4
Description: No description for PF04116.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle