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View Structure Prediction Details

Protein: CAMK3_ARATH
Organism: Arabidopsis thaliana
Length: 595 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAMK3_ARATH.

Description E-value Query
Range
Subject
Range
gi|7446432, gi|1... - pir||T02033 calcium/calmodulin-dependent protein kinase homolog - maize, gi|1839597|gb|AAB47181.1| ...
445.0 [0..1] [594..1]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQCYGKVNQ SKQNGEEEAN TTTYVVSGDG NQIQPLTPVN YGRAKNTPAR SSNPSPWPSP  60
   61 FPHGSASPLP SGVSPSPART STPRRFFRRP FPPPSPAKHI KASLIKRLGV KPKEGPIPE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.73
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #2
Region A:
Residues: [120-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERGTEPEQSL DKSFGYGKNF GAKYELGKEV GRGHFGHTCS GRGKKGDIKD HPIAVKIISK  60
   61 AKMTTAIAIE DVRREVKLLK SLSGHKYLIK YYDACEDANN VYIVMELCDG GELLDRILAR 120
  121 GGKYPEDDAK AIVVQILTVV SFCHLQGVVH RDLKPENFLF TSSREDSDLK LIDFGLSDFI 180
  181 RPDERLNDIV GSAYYVAPEV LHRSYSLEAD IWSIGVITYI LLCGSRPFWA RTESGIFRTV 240
  241 LRTEPNYDDV PWPSCSSEGK DFVKRLLNKD YRKRMSAVQA LTHPWLRDDS RVIPLDILIY 300
  301 KLVKAYLHAT PLRRAALKAL AKAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.522879
Match: 2jc6A
Description: No description for 2jc6A was found.

Predicted Domain #3
Region A:
Residues: [444-595]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TENELVYLRA QFMLLGPNKD GSVSLENFKT ALMQNATDAM RESRVPEILH TMESLAYRKM  60
   61 YFEEFCAAAI SIHQLEAVDA WEEIATAGFQ HFETEGNRVI TIEELARELN VGASAYGHLR 120
  121 DWVRSSDGKL SYLGFTKFLH GVTLRAAHAR PR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.39794
Match: 2aaoA
Description: Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle