YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GDL72_ARATH
Organism: Arabidopsis thaliana
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL72_ARATH.

Description E-value Query
Range
Subject
Range
gi|42572117, gi|... - gi|42572117|ref|NP_974149.1| family II extracellular lipase 1 (EXL1) [Arabidopsis thaliana], gi|2882...
326.0 [0..2] [352..17]
gi|92887597 - gi|92887597|gb|ABE88960.1| Lipolytic enzyme, G-D-S-L [Medicago truncatula]
321.0 [0..24] [352..39]
gi|115478062, gi... - gi|115478062|ref|NP_001062626.1| Os09g0132200 [Oryza sativa (japonica cultivar-group)], gi|113630859...
321.0 [0..7] [352..6]

Back

Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMFITMSMC LSVIACFYAG VGTGETLVPA LIIMGDSVVD AGNNNHRITL VKANFPPYGR  60
   61 DFVAHSATGR FSNGKLATDF TAENLGFTSY PVAYL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQEANETNLL TGANFASGAS GFDDATAIFY NAITLSQQLK NYKEYQNKVT NIVGKERANE  60
   61 IFSGAIHLLS TGSSDFLQSY YINPILNRIF TPDQYSDHLL RSYSTFVQNL YGL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [209-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GARRIGVTTL PPLGCLPAAI TLFGGVGNNM CVERLNQDAV SFNTKLNNTS INLTNNLPGL  60
   61 KLVVFDIYNP LLNMVINPVE YGFFESRRAC CGTGTMETSF LCNALSVGTC SNATNYVFWD 120
  121 GFHPSEAANR VIANNLLVQG IPLIS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle