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View Structure Prediction Details

Protein: SRG1_ARATH
Organism: Arabidopsis thaliana
Length: 358 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRG1_ARATH.

Description E-value Query
Range
Subject
Range
gi|7328337 - gi|7328337|emb|CAB82616.1| gibberellin 20-oxidase [Solanum dulcamara]
338.0 [0..1] [356..6]

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Predicted Domain #1
Region A:
Residues: [1-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR  60
   61 LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK SEIQDFFNLP MEEKKKFWQR 120
  121 PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS 180
  181 VAKILIAKMA RALEIKPEEL EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT 240
  241 VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER 300
  301 LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.69897
Match: 1gp4A
Description: Anthocyanidin synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.29176034651701 bayes_pls_golite062009
oxidoreductase activity 0.188497825387454 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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