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View Structure Prediction Details

Protein: gi|18406621, gi|...
Organism: Arabidopsis thaliana
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18406621, gi|....

Description E-value Query
Range
Subject
Range
TPK2_ARATH - Thiamine pyrophosphokinase 2 OS=Arabidopsis thaliana GN=TPK2 PE=2 SV=1
345.0 [0..1] [265..1]

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Predicted Domain #1
Region A:
Residues: [1-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSAMDVMIH SSSFLLPCDE TCGTRYALVV LNQNLPRFTP LLWEHAKLRL CADGGANRIY  60
   61 DELPLFFPHE DPFVIRNRYK PDVIKGDMDS IRRDVLDFYV YWGTKVIDES HDQDTTDLDK 120
  121 CISYIRHSTL NQESSRILAT GALGGRFDHE AGNLNVLYRY PDTRIVLLSD DCLIQLLPKT 180
  181 HRHEIHIHSS LQGPHCGLIP IGTPSANTTT SGLKWDLSNT EMRFGGLIST SNLVKEEIIT 240
  241 VESDSDLLWT ISIKKTGLPV QDHKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.39794
Match: 1ig3A
Description: Thiamin pyrophosphokinase, substrate-binding domain; Thiamin pyrophosphokinase, catalytic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle