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View Structure Prediction Details

Protein: OPR2_ARATH
Organism: Arabidopsis thaliana
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OPR2_ARATH.

Description E-value Query
Range
Subject
Range
gi|5701740 - gi|5701740|dbj|BAA83083.1| LEDI-5a protein [Lithospermum erythrorhizon]
419.0 [0..9] [373..4]

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Predicted Domain #1
Region A:
Residues: [1-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMVNAEAKQ SVPLLTPYKM GRFNLSHRVV LAPLTRQKSY GSVPQPHAIL YYSQRTSPGG  60
   61 FLIAEATGVS DTAQGYPDTP GIWTKEHVEA WKPIVDAVHA KGGIFFCQIW HVGRVSNRGF 120
  121 QPRRQAPISC TGKPIMPQMR ANGIDEARFT PPRRLSIEEI PGIVNDFRLA ARNAMEAGFD 180
  181 GVEIHGAHGY LIDQFMKDKV NDRTDEYGGS LQNRCKFALE VVDAVAKEIG PDRVGIRLSP 240
  241 FADYMESGDT NPEALGLYMV ESLNKYGILY CHMIEPRMKT VGEIAACSHT LMPMREAFKG 300
  301 TFISAGGFTR EDGNEAVAKG RTDLVAYGRW FLANPDLPKR FQLDAPLNKY NRSTFYTSDP 360
  361 VVGYTDYPSL ESTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 114.0
Match: 1vjiA
Description: Gene Product of At1g76680 from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity 3.50791144647902 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 2.11027907327307 bayes_pls_golite062009
catalytic activity 1.94749091175302 bayes_pls_golite062009
coenzyme binding 0.99234662301893 bayes_pls_golite062009
binding 0.724672865863266 bayes_pls_golite062009
nucleic acid binding 0.350068675013616 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.0276497014195508 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle