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View Structure Prediction Details

Protein: BGL42_ARATH
Organism: Arabidopsis thaliana
Length: 490 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BGL42_ARATH.

Description E-value Query
Range
Subject
Range
gi|79329098 - gi|79329098|ref|NP_001031975.1| BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation bi...
558.0 [0..1] [487..1]

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Predicted Domain #1
Region A:
Residues: [1-490]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKLNLLNL AVPPVTHRSN FPSTFTFGVA TSAYQIEGGW NEGKKGPSIW DKFTHIEGKI  60
   61 LDGSNGDVAV DHYHRYKEDV DLIGQLGFGA YRFSISWSRI FPDGLGTEVN EEGIAFYNDL 120
  121 INTLLEKGIQ PYVTLYHWDL PSHLQEAIGG WTNRKIVDYF GLYADACFAN FGDRVKHWIT 180
  181 LNEPLQTSVN GHCIGIFAPG RNEKPLIEPY LVSHHQVLAH ATAVSIYRSK YKESQGGQIG 240
  241 LSVDCEWAEP NSEKPEDKVA ADRRIDFQLG WFLDPLFFGD YPASMRQKLG DNLPRFTPEE 300
  301 KEFMLQNSWD FLGLNHYTSR LISHVSNKEA ESNFYQAQEL ERIVELENGD LIGERAASDW 360
  361 LYAVPWGIRK TLNYMSKKYN HPPIFITENG MDDEDDGSAS IHDMLDDKRR VDYFKSYLAN 420
  421 VSQAIEDGVD IKGYFAWSLL DNFEWAQGYT KRFGLVYVDY KNGLTRHPKS SAYWFMKFLK 480
  481 GDEENKGKKE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 141.0
Match: 1cbgA
Description: THE CRYSTAL STRUCTURE OF A CYANOGENIC BETA-GLUCOSIDASE FROM WHITE CLOVER (TRIFOLIUM REPENS L.), A FAMILY 1 GLYCOSYL-HYDROLASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 3.24393624203556 bayes_pls_golite062009
hydrolase activity 3.12004689536171 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 3.00088487541785 bayes_pls_golite062009
lactase activity 2.27319636254051 bayes_pls_golite062009
catalytic activity 1.85569074294201 bayes_pls_golite062009
hexosaminidase activity 0.830837669932069 bayes_pls_golite062009
glucosidase activity 0.50219358960551 bayes_pls_golite062009
chitinase activity 0.500233744020165 bayes_pls_golite062009
beta-N-acetylhexosaminidase activity 0.369121784919131 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.121443733937724 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle