| Protein: | DOF35_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 247 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DOF35_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
211.0 | [0..5] | [194..20] |
|
|
190.0 | [0..9] | [161..34] |
|
|
167.0 | [0..18] | [169..30] |
|
|
161.0 | [0..20] | [247..10] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MERAEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT 60
61 KGGSLRNVPV GGGCRKSRRP KSSSGN
|
| Detection Method: |  |
| Confidence: | 0.963 |
| Match: | 1i3qI |
| Description: | RBP9 subunit of RNA polymerase II |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [87-247] |
1 11 21 31 41 51
| | | | | |
1 NTKTSLTANS GNPGGGSPSI DLALVYANFL NPKPDESILQ ENCDLATTDF LVDNPTGTSM 60
61 DPSWSMDIND GHHDHYINPV EHIVEECGYN GLPPFPGEEL LSLDTNGVWS DALLIGHNHV 120
121 DVGVTPVQAV HEPVVHFADE SNDSTNLLFG SWSPFDFTAD G
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
