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View Structure Prediction Details

Protein: gi|6997164, gi|2...
Organism: Arabidopsis thaliana
Length: 251 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6997164, gi|2....

Description E-value Query
Range
Subject
Range
gi|22854914, gi|... - gi|22854918|gb|AAN09814.1| COL1 protein [Brassica nigra], gi|22854914|gb|AAN09812.1| COL1 protein [B...
207.0 [0..4] [203..157]

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Predicted Domain #1
Region A:
Residues: [1-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSLPQFYA DFTTFSCETS SQFHGSSSCP DVDSSLSSYL DDCYGSFNTS SNPESIFVPQ  60
   61 VFGISDVSVP EYNNYYQKMS VNNATHYFHG GDHQEYYGFS PEIKPLFRPA TGEQSWGNSE 120
  121 GGIQAEPNTK VGRYSVEERK DRIMRYLKKK NQRNFNKTIK YVCRKTLADR RVRVRGRFAR 180
  181 NNDTCEEQPH MSKNHNNHSE KEEDMFSGSD DYLIQMEHDD GWLHEAMSNL IPFPCEFDAP 240
  241 GDAHHPTNWS F

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Detection Method: MSA

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle