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View Structure Prediction Details

Protein: PAE12_ARATH
Organism: Arabidopsis thaliana
Length: 415 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAE12_ARATH.

Description E-value Query
Range
Subject
Range
PAE10_ARATH - Pectin acetylesterase 10 OS=Arabidopsis thaliana GN=PAE10 PE=2 SV=1
639.0 [0..1] [415..1]

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Predicted Domain #1
Region A:
Residues: [1-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLLLVGFV VAGIILGTQA NEYLDFNVTE IDRIEELEFG FSKYSSNLNP LMVGLTLIRG  60
   61 ADSGAVCLDG TLPGYHLHRG HGSGANSWLI QLEGGGWCNN IRTCVYRKTT RRGSSNYMEK 120
  121 QLQFTGILSD KAQENPDFFN WNRVKLRYCD GASFSGDGQN QAAQLQFRGE RIWRAAIDDL 180
  181 KANGMRYANQ ALLSGCSAGG LAAILRCDEF RNLFPGSTKV KCLSDAGLFL DTADVSGGRT 240
  241 IRNLYNGVVE LQSVKNNLPR ICTNHLDPTS CFFPQNLISQ MKTPLFIVNA AYDTWQIQSS 300
  301 IAPTSADPSG FWHDCRLNHG KCTPAQLRFL QGFREQMLRV VKGFSMS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.36
Match: 1l7aA
Description: Cephalosporin C deacetylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.768312194494454 bayes_pls_golite062009
hydrolase activity 0.305773042344667 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [348-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQNGLFINSC FAHCQTERQD TWFADDSPVI RKKAVAIAVG DWYFDRAEVK LVDCPYPCDK  60
   61 SCHNLVFR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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