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View Structure Prediction Details

Protein: ERF24_ARATH
Organism: Arabidopsis thaliana
Length: 184 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF24_ARATH.

Description E-value Query
Range
Subject
Range
gi|41351817 - gi|41351817|gb|AAS00621.1| DREB1 [Thellungiella salsuginea]
208.0 [0..3] [183..39]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGTSKDNGG RHPLYRGVRQ RKNSNKWVSE IREPRKPNRI WLGTFSTPEM AAIAYDVAAL  60
   61 ALKGSQAELN FPNSVSSLPA PTSMSPADIQ AAAASAAAAF GAARDAIVMA NNNSQTSGVA 120
  121 CM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.154902
Match: 2gccA
Description: SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.339357445627225 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [123-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSSYDNTNMN GFMDEDLVFD MPNVLMNMAE GMLLSPPRPT VFDAAYDADG FPGGDDYLWN  60
   61 FP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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