| Protein: | PMT1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 611 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PMT1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
466.0 | [0..1] | [611..1] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MRGRSEGGKK KPVIVLLCVA SVVLVFVYLF FGSSNHKAIE YGRKLGLGGD DDDSTKKDDT 60
61 SSSFYVEDVV GNGFTPRSFP VCDDRHSELI PCLDRNLIYQ MRLKLDLSLM EHYERHCPPP 120
121 ERRFNCLIPP PPGYKIPIKW PKSRDEVW
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [149-422] |
1 11 21 31 41 51
| | | | | |
1 KVNIPHTHLA HEKSDQNWMV VKGEKINFPG GGTHFHYGAD KYIASMANML NFPNNVLNNG 60
61 GRLRTFLDVG CGVASFGGYL LASEIMTMSL APNDVHQNQI QFALERGIPA YLGVLGTKRL 120
121 PYPSRSFELA HCSRCRIDWL QRDGILLLEL DRVLRPGGYF AYSSPEAYAQ DEEDLRIWRE 180
181 MSALVGRMCW TIAAKRNQTV IWQKPLTNDC YLGREPGTQP PLCNSDSDPD AVYGVNMEAC 240
241 ITQYSDHDHK TKGSGLAPWP ARLTSPPPRL ADFG
|
| Detection Method: | |
| Confidence: | 28.522879 |
| Match: | 1p91A |
| Description: | Crystal Structure of RlmA(I) enzyme: 23S rRNA n1-G745 methyltransferase (NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER19) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.723277178398499 | bayes_pls_golite062009 |
| transferase activity | 0.64512166557639 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.54403439349476 | bayes_pls_golite062009 |
| methyltransferase activity | 0.54389223881989 | bayes_pls_golite062009 |
|
Region A: Residues: [423-611] |
1 11 21 31 41 51
| | | | | |
1 YSTDIFEKDT ETWRQRVDTY WDLLSPKIQS DTVRNIMDMK ASMGSFAAAL KEKDVWVMNV 60
61 VPEDGPNTLK LIYDRGLMGA VHSWCEAFST YPRTYDLLHA WDIISDIKKR GCSAEDLLLE 120
121 MDRILRPSGF ILIRDKQSVV DLVKKYLKAL HWEAVETKTA SESDQDSDNV ILIVQKKLWL 180
181 TSESLRDLE
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 1xxlA |
| Description: | The crystal structure of YcgJ protein from Bacillus subitilis at 2.1 A resolution |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.723277178398499 | bayes_pls_golite062009 |
| transferase activity | 0.64512166557639 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.54403439349476 | bayes_pls_golite062009 |
| methyltransferase activity | 0.54389223881989 | bayes_pls_golite062009 |
