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View Structure Prediction Details

Protein: gi|6721154, gi|1...
Organism: Arabidopsis thaliana
Length: 244 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6721154, gi|1....

Description E-value Query
Range
Subject
Range
gi|7438248, gi|2... - pir||T07871 miraculin homolog, root-knot nematode-induced - tomato, gi|2654440|gb|AAC63057.1| Lemir ...
239.0 [0..42] [238..1]

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Predicted Domain #1
Region A:
Residues: [1-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSRKKTKKN VYCNQPIMSI ISIKGNSRQE HKSKKIRNNT KMKTFQLMMI SFLFVAITTT  60
   61 SGVVSEGNDV VYDGEGDPVK PNVPYYISFM TSDYNMWICR MQYGSTDPNS CPQQPLMVTH 120
  121 PNLAAPTPVM FVLANKSDVV RESAKLKIKF VGPRQCGKSG FWKVVQRNSS EGEVFLNGSK 180
  181 SMSHNDSTFA IHKTNEYYKF TFGDGDYPTT ISMTNDYPIY RLLSKRLSGE MEIYFYKNLT 240
  241 TSEG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.69897
Match: 1xg6A
Description: The crystal structure of the P1 mutant (Leu to Arg)of a Winged bean chymotrypsin inhibitor(Kunitz)solved at 2.15A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle