| Protein: | gi|6730713, gi|4... |
| Organism: | Arabidopsis thaliana |
| Length: | 267 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6730713, gi|4....
| Description | E-value | Query Range |
Subject Range |
|
|
208.0 | [0..1] | [264..1] |
|
|
205.0 | [0..1] | [260..1] |
|
|
196.0 | [0..1] | [182..1] |
|
|
195.0 | [0..1] | [267..1] |
|
|
194.0 | [0..1] | [191..1] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MGRTTWFDVD GMKKGEWTAE EDQKLGAYIN EHGVCDWRSL PKRAGLQRCG KSCRLRWLNY 60
61 LKPGIRRGKF TPQEEEEIIQ LHAVLGNRWA AMAKKMQNRT DNDIKNHWNS CLKKRLSR
|
| Detection Method: |  |
| Confidence: | 32.30103 |
| Match: | 1a5jA |
| Description: | CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [119-267] |
1 11 21 31 41 51
| | | | | |
1 KGIDPMTHEP IIKHLTVNTT NADCGNSSTT TSPSTTESSP SSGSSRLLNK LAAGISSRQH 60
61 SLDRIKYILS NSIIESSDQA KEEEEKEEEE EERDSMMGQK IDGSEGEDIQ IWGEEEVRRL 120
121 MEIDAMDMYE MTSYDAVMYE SSHILDHLF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.248 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.248 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.204 | a.250.1 | Description not found. |
