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View Structure Prediction Details

Protein: gi|15222527, gi|...
Organism: Arabidopsis thaliana
Length: 966 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|15222527, gi|....

Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSSPRT WRYRVFTSFH GPDVRKTVLS HLRKQFICNG ITMFDDQRIE RGQTISPELT  60
   61 RGIRESRISI VVLSKNYASS SWCLDELLEI LKCKEDIGQI VMTVFYGVDP SDVRKQTGEF 120
  121 GIRFSETWAR KTEEEKQKWS QALNDVGNIA GEHFLN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 54.522879
Match: PF01582.12
Description: No description for PF01582.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [157-617]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WDKESKMVET IARDVSNKLN TTISKDFEDM VGIEAHLQKM QSLLHLDNED EAMIVGICGP  60
   61 SGIGKTTIAR ALHSRLSSSF QLTCFMENLK GSYNSGLDEY GLKLCLQQQL LSKILNQNDL 120
  121 RIFHLGAIPE RLCDQNVLII LDGVDDLQQL EALTNETSWF GPGSRIIVTT EDQELLEQHD 180
  181 INNTYHVDFP TIKEARKIFC RSAFRQSSAP YGFEKLVERV LKLCSNLPLG LRVMGSSLRR 240
  241 KKEDDWESIL HRQENSLDRK IEGVLRVGYD NLHKNDQFLF LLIAFFFNYQ DNDHVKAMLG 300
  301 DSKLDVRYGL KTLAYKSLIQ ISIKGDIVMH KLLQQVGKEA VQRQDHGKRQ ILIDSDEICD 360
  361 VLENDSGNRN VMGISFDIST LLNDVYISAE AFKRIRNLRF LSIYKTRLDT NVRLHLSEDM 420
  421 VFPPQLRLLH WEVYPGKSLP HTFRPEYLVE LNLRDNQLEK L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.0
Match: 1z6tA
Description: Structure of the apoptotic protease-activating factor 1 bound to ADP
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [618-966]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WEGIQPLTNL KKMELLRSSN LKVLPNLSDA TNLEVLNLAL CESLVEIPPS IGNLHKLEKL  60
   61 IMDFCRKLKV VPTHFNLASL ESLGMMGCWQ LKNIPDISTN ITTLKITDTM LEDLPQSIRL 120
  121 WSGLQVLDIY GSVNIYHAPA EIYLEGRGAD IKKIPDCIKD LDGLKELHIY GCPKIVSLPE 180
  181 LPSSLKRLIV DTCESLETLV HFPFESAIED LYFSNCFKLG QEARRVITKQ SRDAWLPGRN 240
  241 VPAEFHYRAV GNSLTIPTDT YECRICVVIS PKQKMVEFFD LLCRQRKNGF STGQKRLQLL 300
  301 PKVQAEHLFI GHFTLSDKLD SGVLLEFSTS SKDIDIIECG IQIFHGHYR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.522879
Match: 2z64A
Description: No description for 2z64A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle