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View Structure Prediction Details

Protein: HST_ARATH
Organism: Arabidopsis thaliana
Length: 433 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HST_ARATH.

Description E-value Query
Range
Subject
Range
gi|67921998, gi|... - gi|67921998|ref|ZP_00515514.1| Non-ribosomal peptide synthase:Amino acid adenylation [Crocosphaera w...
376.0 [0..3] [433..1101]

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Predicted Domain #1
Region A:
Residues: [1-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL  60
   61 SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS VIDDFGDFAP TLNLRQLIPE 120
  121 VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP 180
  181 PFIDRTLLRA RDPPQPAFHH VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA 240
  241 KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN 300
  301 VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT 360
  361 YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS FVLPSPTNDG SLSVAIALQS 420
  421 EHMKLFEKFL FEI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.69897
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle