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View Structure Prediction Details

Protein: SBT23_ARATH
Organism: Arabidopsis thaliana
Length: 840 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SBT23_ARATH.

Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRVMLVRFG FLLLMISFVF LSNNTLGQQQ DDDDDSAVYI VTLKQPPIVH LFEEQELKHK  60
   61 KSKFTPKLRP RNNSRKRHGK SKIPSVVQSH DSFLRKTLKG EKYIKLYSYH YLINGFALFI 120
  121 NSQQAEKLSM RKEVANIVLD YSVRTATTYT PQFMGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.522879
Match: 2p4eP
Description: No description for 2p4eP was found.

Predicted Domain #2
Region A:
Residues: [157-840]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQGAWVKEGG FEIAGEGVII GFIDTGIDPN HPSFNDNDSK RSYPIPKHFS GVCEVTPDFP  60
   61 SGSCNKKLIG ARHFAQSAVT RGIFNSSEDY ASPFDGDGHG THTASVAAGN HGVPVIVSNH 120
  121 NFGYASGIAP RAFISVYKAL YKSFGGFAAD VVAAIDQAAQ DGVDILSLSI TPNRKPPGVA 180
  181 TFFNPIDMAL LSAVKAGIFV VQAAGNTGPA PKTMSSFSPW IFTVGASSHD RVYSNSLTLG 240
  241 NNVTIPGMGF AIPTDSGKMY KMISAFHALN NSTSVDKDMY VGECQDYENF DQDRVSGKLL 300
  301 ICSYSARFVL GLSTIKQALD VAKNLSATGV IFYIDPYVLG FEINPTPMDM PGIIIPSVED 360
  361 SKTLLKYYNS SIQRDVTTKE IVSFGAVAAI EGGLNANFSN RAPKVMYYSA RGPDPEDNSF 420
  421 NDADVLKPNL VAPGNSIWGA WSSASTDSTE FEGEKFAMMS GTSMAAPHVA GVAALIKQSY 480
  481 PQFTPSTISS ALSTTALLND NKGSPIMAQR TYSNPDQSLY TATPSDMGSG FVNATAALDP 540
  541 GLVFDTSFED YISFLCGING SDTVVFNYTG FRCPANNTPV SGFDLNLPSI TVSTLSGTQT 600
  601 FQRSMRNIAG NETYNVGWSP PYGVSMKVSP TQFSIAMGEN QVLSVTLTVT KNSSSSSFGR 660
  661 IGLFGNTGHI VNIPVTVIAK IASS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.69897
Match: 1xf1A
Description: Structure of C5a peptidase- a key virulence factor from Streptococcus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle