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View Structure Prediction Details

Protein: gi|25365957, gi|...
Organism: Arabidopsis thaliana
Length: 239 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25365957, gi|....

Description E-value Query
Range
Subject
Range
gi|21805698 - gi|21805698|gb|AAM76756.1| hypothetical protein [Arabidopsis thaliana]
209.0 [0..1] [239..1]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARIRRRIQK RHIHENRYID FFGERLIVTV THTTSTIRRW IHSIRFFSRL RSSHPLVVGL  60
   61 DVQWTPGGSD PPPDILQLCV GNRCLIIQLS HCKRIPEVLR SFLEDETITF VGVWNSQDQG 120
  121 KLERFRHQLE IWRLLDIRHY LPTRLLNSSF EKIVEECLGY KGVRKDKEIC MSNWGARSLS 180
  181 HDQIVQASDD VYVCCKLGVK ECIWKERSNV KERIWKESSN VKEHIWKESS KLYFVGVCF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.69897
Match: 1dpiA
Description: STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle