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View Structure Prediction Details

Protein: gi|4406818, gi|1...
Organism: Arabidopsis thaliana
Length: 202 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4406818, gi|1....

Description E-value Query
Range
Subject
Range
TA14B_ARATH - Transcription initiation factor TFIID subunit 14b OS=Arabidopsis thaliana GN=TAF14B PE=1 SV=1
226.0 [0..9] [197..13]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESDIEILSE ADASMRKLRI FGIDDREDEN GRRRIKDVEV YVPIVCGSIA FYLGKKATEY  60
   61 RTHKWTVYVR GATNEDLGVV IKRVIFHLHP SFNNPTRVVD APPFALSECG WGEFKIDITV 120
  121 FFHTDVCEKK LELSHVLKLN PENAYGPIPK SIKIPVVAES YNEVVFPDPF ESFVARVHNH 180
  181 PAIQISNIPD GLNLPPPGAF LF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 42.283997
Match: PF03366.7
Description: No description for PF03366.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle