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View Structure Prediction Details

Protein: FLA9_ARATH
Organism: Arabidopsis thaliana
Length: 247 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLA9_ARATH.

Description E-value Query
Range
Subject
Range
gi|24417458 - gi|24417458|gb|AAN60339.1| unknown [Arabidopsis thaliana]
219.0 [0..1] [247..1]

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Predicted Domain #1
Region A:
Residues: [1-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTRLTLAP LLLIAAVLLA TKATAQPAAP APEPAGPINL TAILEKGGQF TTFIHLLNIT  60
   61 QVGSQVNIQV NSSSEGMTVF APTDNAFQNL KPGTLNQLSP DDQVKLILYH VSPKYYSMDD 120
  121 LLSVSNPVRT QASGRDNGVY GLNFTGQTNQ INVSTGYVET RISNSLRQQR PLAVYVVDMV 180
  181 LLPGEMFGEH KLSPIAPAPK SKSGGVTDDS GSTKKAASPS DKSGSGEKKV GLGFGLGLIV 240
  241 LCLKFLF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 1x3bA
Description: Solution structure of the FAS1 domain of human transforming growth factor-beta induced protein IG-H3
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle