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View Structure Prediction Details

Protein: VP241_ARATH
Organism: Arabidopsis thaliana
Length: 229 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VP241_ARATH.

Description E-value Query
Range
Subject
Range
gi|74001062 - gi|74001062|ref|XP_544799.2| PREDICTED: similar to chromatin modifying protein 2B [Canis familiaris]
209.0 [0..3] [222..580]

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Predicted Domain #1
Region A:
Residues: [1-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERVMNIIKP KPDPKQLLRD WQRKLRQECR NIERQIRDIQ KEERNVQKAI KEAAKRNDMV  60
   61 SAKALAKEIV SSRRTVNRLY ENKAQMNSIS MHLGESVAIA RTVGHLSKSA EVMKLVNNLM 120
  121 KAPQMAATMQ EFSKEMTKAG VIEEFVNEAI DNALDSEDME EEIDEEVDKV LTAIAGETAA 180
  181 ELPVAVRKER IKVPAQKAST SREEEAVAEG VDDEEELEEI RARLAKVRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.69897
Match: 2gd5A
Description: No description for 2gd5A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle