YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ACCH6_ARATH
Organism: Arabidopsis thaliana
Length: 360 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACCH6_ARATH.

Description E-value Query
Range
Subject
Range
gi|5031283 - gi|5031283|gb|AAD38147.1|AF139500_1 unknown [Prunus armeniaca]
345.0 [0..4] [360..8]

Back

Predicted Domain #1
Region A:
Residues: [1-360]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METKEFDSYS ERKAFDETKT GVKGLIDAHI TEIPRIFCLP QGSLSDKKPF VSTTDFAIPI  60
   61 IDFEGLHVSR EDIVGKIKDA ASNWGFFQVI NHGVPLNVLQ EIQDGVRRFH EEAPEVKKTY 120
  121 FTRDATKRFV YNSNFDLYSS SSCVNWRDSF ACYMAPDPPN PEDLPVACRV AMFEYSKHMM 180
  181 RLGDLLFELL SEALGLRSDK LKSMDCMKGL LLLCHYYPPC PQPDLTIGTN NHSDNSFLTI 240
  241 LLQDQIGGLQ IFHQDCWVDV SPIPGALVIN MGDFLQLITN DKVISVEHRV LANRAATPRI 300
  301 SVASFFSTSM RPNSTVYGPI KELLSEENPS KYRVIDLKEY TEGYFKKGLD GTSYLSHYKI 360
  361 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.39794
Match: 2brtA
Description: No description for 2brtA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 1.29176034651701 bayes_pls_golite062009
oxidoreductase activity 0.188497825387454 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle