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View Structure Prediction Details

Protein: TCP10_ARATH
Organism: Arabidopsis thaliana
Length: 361 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TCP10_ARATH.

Description E-value Query
Range
Subject
Range
gi|29788719 - gi|29788719|gb|AAP03340.1| DICHOTOMA-like protein [Lophospermum sp. 91/97]
258.0 [0..2] [270..56]

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Predicted Domain #1
Region A:
Residues: [1-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLKGYSVGE GGGEIVEVQG GHIIRATGRK DRHSKVFTSK GPRDRRVRLS AHTAIQFYDV  60
   61 QDRLGYDRPS KAVDWLIKKA KTAIDKLELG ETTTTTTRQE PVNTKPESPT LVFQRENNDQ 120
  121 TQFVAANLDP EDAMKTFFPA TTTTNGGGGT NINFQNYPHQ DDNNMVSRTT TPPPNLSQDL 180
  181 GLSLHPFQGN NNTVVVPETN NFTTTHFDTF GRISGWNHHD LTMTSSSSSE HQQQEQEERS 240
  241 NGGFMVNHHP HHHH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 32.619789
Match: PF03634.4
Description: No description for PF03634.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [255-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HQPSMMTLLN SQQQQVFLGG QQQQQQRGTL QSSLFPHSFR SWDHHQTTSD HHHHQNQASS  60
   61 MFASSSQYGS HGMMMMQGLS FPNTTRLLHG EEATQPNSSS SPPNSHL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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