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View Structure Prediction Details

Protein: ACCC_ARATH
Organism: Arabidopsis thaliana
Length: 537 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACCC_ARATH.

Description E-value Query
Range
Subject
Range
gi|13430734 - gi|13430734|gb|AAK25989.1|AF360279_1 putative acetyl-CoA carboxylase [Arabidopsis thaliana]
588.0 [0..1] [537..1]

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Predicted Domain #1
Region A:
Residues: [1-537]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDASMITNSK SITSPPSLAL GKSGGGGVIR SSLCNLMMPS KVNFPRQRTQ TLKVSQKKLK  60
   61 RATSGGLGVT CSGGDKILVA NRGEIAVRVI RTAHEMGIPC VAVYSTIDKD ALHVKLADEA 120
  121 VCIGEAPSNQ SYLVIPNVLS AAISRGCTML HPGYGFLSEN ALFVEMCRDH GINFIGPNPD 180
  181 SIRVMGDKAT ARETMKNAGV PTVPGSDGLL QSTEEAVRVA NEIGFPVMIK ATAGGGGRGM 240
  241 RLAKEPGEFV KLLQQAKSEA AAAFGNDGCY LEKFVQNPRH IEFQVLADKF GNVVHFGERD 300
  301 CSIQRRNQKL LEEAPSPALT AELRKAMGDA AVAAAASIGY IGVGTVEFLL DERGSFYFME 360
  361 MNTRIQVEHP VTEMIYSVDL IEEQIRVAMG EKLRYKQEDI VLRGHSIECR INAEDPFKGF 420
  421 RPGPGRITSY LPSGGPFVRM DSHVYSDYVV PPSYDSLLGK LIVWAPTREK AIERMKRALN 480
  481 DTIITGVPTT INYHKLILDV EDFKNGKVDT AFIVKHEEEL AEPQEIVAVK DLTNATV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 141.0
Match: 2gpsA
Description: No description for 2gpsA was found.

Predicted functions:

Term Confidence Notes
CoA carboxylase activity 9.83581323285097 bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds 9.81059565938621 bayes_pls_golite062009
acetyl-CoA carboxylase activity 9.76633430002009 bayes_pls_golite062009
ligase activity 7.71401892529536 bayes_pls_golite062009
biotin carboxylase activity 6.9547407447638 bayes_pls_golite062009
carbamoyl-phosphate synthase activity 4.25267317906061 bayes_pls_golite062009
carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity 4.17451795830682 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 3.45358843752722 bayes_pls_golite062009
catalytic activity 2.5009559386228 bayes_pls_golite062009
phosphoribosylaminoimidazole carboxylase activity 1.57708889650281 bayes_pls_golite062009
carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.11645327303429 bayes_pls_golite062009
phosphoribosylamine-glycine ligase activity 1.04915286326924 bayes_pls_golite062009
ligase activity, forming carbon-sulfur bonds 0.695070201354335 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle