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View Structure Prediction Details

Protein: TPS10_ARATH
Organism: Arabidopsis thaliana
Length: 861 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for TPS10_ARATH.

Predicted Domain #1
Region A:
Residues: [1-589]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSKSFGNLL DLASGDLLDI PQTPRYLPRV MTVPGIISDV DGYGISDGDS DVISLPCRER  60
   61 KIIVANFLPL NGKKDSETGK WKFSLDNDSP LLHLKDGFSP ETEVIYVGSL KTHVDVSEQD 120
  121 EVSHNLFEEF NCVATFLPQD VHKKFYLGFC KQQLWPLFHY MLPMCPDHGE RFDRGLWQAY 180
  181 VSANKIFADK VMGVINLEED YIWIHDYHLM VLPTFLRRRF HRVKLGFFLH SPFPSSEIYR 240
  241 TLPVREELLR GLLNCDLIGF HTFDYARHFL SCCCRMLGLE YESKRGHIAL DYLGRTVFLK 300
  301 ILPIGIHMGR LESVLNLPAT AEKLKEIQEK YRGKKIILGV DDMDIFKGLS LKILAFEHLL 360
  361 QQYPSMLGKI VLIQIVNPAR GSGKDVQEAR KETYDTVKRI NERYGSHDYE PVVLIDRPVP 420
  421 RFEKSAYYAL AECCIVNAVR DGMNLVPYKY TVCRQGTPSM NKSLGVSDDL PRTSTLVLSE 480
  481 FIGCSPSLSG AIRVNPWDVD AVADSLYSAI TMSDFEKQLR HKKHFHYIST HDVGYWARSF 540
  541 SQDLERASRD HYSKRCWGVG WGLGFRLVAL SPNFRRLSIE QTVSAYRRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.522879
Match: 1uqtA
Description: Trehalose-6-phosphate from E. coli bound with UDP-2-fluoro glucose.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [590-861]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKRAIFLDYD GTLVPETSIV KDPSAEVISA LKALCSDPNN TIFIVSGRGK VSLSEWLAPC  60
   61 ENLGIAAEHG YFTRWNKSSD WETSGLSDDL EWKKVVEPIM RLYTETTDGS NIEAKESALV 120
  121 WHHQDADPDF GSCQAKELLD HLETVLVNEP VIVNRGHQIV EVKPQGVSKG LVTGKILSRM 180
  181 LEDGIAPDFV VCIGDDRSDE EMFENISTTL SAQSSSMSTE IFACTVGRKP SKAKYFLDEV 240
  241 SDVVKLLQGL ANTSSPKPRY PSHLRVSFES VV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.09691
Match: 1rkqA
Description: Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle