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View Structure Prediction Details

Protein: gi|110743666, gi...
Organism: Arabidopsis thaliana
Length: 239 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110743666, gi....

Description E-value Query
Range
Subject
Range
gi|21554208 - gi|21554208|gb|AAM63287.1| putative carboxymethylenebutenolidase [Arabidopsis thaliana]
161.0 [0..1] [239..1]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSAFRKIQ IQRDDTTFDA YVVGKDDAPG IVVIQEWWGV DFEIKNHAIK ISQLEPGFKA  60
   61 LIPDLYRGKV GLDTAEAQHL MDGLDWPGAI KDIRASVNWL KSNGSKKVGV TGMCMGGALA 120
  121 IASSVLVPEV DAVVGFYGTP SSELADPAQA KAPIQAHFGE LDNFVGFSDV TAAKNLEEKL 180
  181 KASGVAHEVH IYPGNGHAFL NRSPEGVSRR KSMGLSDEDE AAVELAWSRF TSWMKQYLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.522879
Match: 1a88A
Description: Chloroperoxidase L
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.629869101256762 bayes_pls_golite062009
hydrolase activity 0.512422589119661 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle