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View Structure Prediction Details

Protein: CESA7_ARATH
Organism: Arabidopsis thaliana
Length: 1026 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CESA7_ARATH.

Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEASAGLVAG SHNRNELVVI HNHEEPKPLK NLDGQFCEIC GDQIGLTVEG DLFVACNECG  60
   61 FPACRPCYEY ERREGTQNCP QCKTRYKRLR GSPRVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.69897
Match: 1weoA
Description: Solution structure of RING-finger in the catalytic subunit (IRX3) of cellulose synthase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [97-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDEDEEDIDD IEYEFNIEHE QDKHKHSAEA MLYGKMSYGR GPEDDENGRF PPVIAGGHSG  60
   61 EFPVGGGYGN GEHGLHKRVH PYPSSEAGSE GGWRERMDDW KLQHGNLGPE PDDDPEMGLI 120
  121 DEAR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [221-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPLSRKVPIA SSKINPYRMV IVARLVILAV FLRYRLLNPV HDALGLWLTS VICEIWFAVS  60
   61 WILDQFPKWF PIERETYLDR LSLRYEREGE PNMLAPVDVF VSTVDPLKEP PLVTSNTVLS 120
  121 ILAMDYPVEK ISCYVSDDGA SMLTFESLSE TAEFARKW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [379-668]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPFCKKFSIE PRAPEMYFTL KVDYLQDKVH PTFVKERRAM KREYEEFKVR INAQVAKASK  60
   61 VPLEGWIMQD GTPWPGNNTK DHPGMIQVFL GHSGGFDVEG HELPRLVYVS REKRPGFQHH 120
  121 KKAGAMNALV RVAGVLTNAP FMLNLDCDHY VNNSKAVREA MCFLMDPQIG KKVCYVQFPQ 180
  181 RFDGIDTNDR YANRNTVFFD INMKGLDGIQ GPVYVGTGCV FKRQALYGYE PPKGPKRPKM 240
  241 ISCGCCPCFG RRRKNKKFSK NDMNGDVAAL GGAEGDKEHL MSEMNFEKTF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.522879
Match: 2z87A
Description: No description for 2z87A was found.

Predicted Domain #5
Region A:
Residues: [669-771]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQSSIFVTST LMEEGGVPPS SSPAVLLKEA IHVISCGYED KTEWGTELGW IYGSITEDIL  60
   61 TGFKMHCRGW RSIYCMPKRP AFKGSAPINL SDRLNQVLRW ALG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [772-956]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVEIFFSRHS PLWYGYKGGK LKWLERFAYA NTTIYPFTSI PLLAYCILPA ICLLTDKFIM  60
   61 PPISTFASLF FISLFMSIIV TGILELRWSG VSIEEWWRNE QFWVIGGISA HLFAVVQGLL 120
  121 KILAGIDTNF TVTSKATDDD DFGELYAFKW TTLLIPPTTV LIINIVGVVA GISDAINNGY 180
  181 QSWGP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.09691
Match: 1ehkA
Description: Bacterial ba3 type cytochrome c oxidase subunit I
Matching Structure (courtesy of the PDB):

Predicted Domain #7
Region A:
Residues: [957-1026]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFGKLFFSFW VIVHLYPFLK GLMGRQNRTP TIVVIWSVLL ASIFSLLWVR IDPFVLKTKG  60
   61 PDTSKCGINC 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle