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View Structure Prediction Details

Protein: RBL2_ARATH
Organism: Arabidopsis thaliana
Length: 317 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RBL2_ARATH.

Description E-value Query
Range
Subject
Range
RBL6_ARATH - RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana GN=RBL6 PE=2 SV=1
255.0 [0..1] [317..1]

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Predicted Domain #1
Region A:
Residues: [1-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRDVERVG KKNRGANNNY FYEESSGETH WTSWLIPAIV VANLAVFIAV MFVNDCPKKI  60
   61 TGPNKECVAR FLGRFSFQPL KENPLFGPSS STLEKMGALE WRKVVHEHQG WRLLSCMWLH 120
  121 AGIIHLLTNM LSLIFIGIRL EQQFGFIRVG LIYLISGLGG SILSSLFLQE SISVGASGAL 180
  181 FGLLGAMLSE LLTNWTIYAN KAAALITLLF IIAINLALGM LPRVDNFAHI GGFLTGFCLG 240
  241 FVLLVRPQYG WEASRTNTSR TKRKYSMYQY VLFVVSVVLL VVGLTVALVM LFKGENGNKH 300
  301 CKWCHYLSCF PTSKWTC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.09691
Match: 2nr9A
Description: No description for 2nr9A was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.015349122465922 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle