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View Structure Prediction Details

Protein: gi|12323541, gi|...
Organism: Arabidopsis thaliana
Length: 140 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12323541, gi|....

Description E-value Query
Range
Subject
Range
gi|15234679, gi|... - gi|7269042|emb|CAB79152.1| hypothetical protein [Arabidopsis thaliana], gi|2961342|emb|CAA18100.1| h...
141.0 [0..10] [137..12]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEFDESEI IFSDNYFPIR RREDGNEKEN NRPVDFRENS ERVWNKSSRR SKTTPLPSAV  60
   61 TAFSSSLPVN IPMRRYSTEE EYSDDDGGRK MIPPHLIVGR RMEGGQMAFS VCTGNGRTLK 120
  121 GRDLSRVRNS VLKLTGFLEA 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 70.886057
Match: PF04520.4
Description: No description for PF04520.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle