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View Structure Prediction Details

Protein: SBT26_ARATH
Organism: Arabidopsis thaliana
Length: 816 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SBT26_ARATH.

Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIGCKVLVF FTCFLTVTAE IYIVTMEGEP IISYKGGDNG FEATAVESDE KIDTTSELVT  60
   61 SYARHLERKH DMLLGMLFVE GSYKKLYSYK HLINGFAAHV SPDQAEMLRR APGVKSVDRD 120
  121 WKVRKLTTHT PQFLGLPTDV WPTGGGYDR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.30103
Match: 1r6vA
Description: Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [150-816]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGEDIVIGFI DSGIFPHHPS FASHHTTVPY GPHPSYKGKC EEDPHTKISF CNGKIIGAQH  60
   61 FAEAAKAAGA FNPDIDFASP MDGDGHGSHT AAIAAGNNGI PVRMHGYEFG KASGMAPRAR 120
  121 IAVYKALYRL FGGFVADVVA AIDQAVHDGV DILSLSVGPN SPPATTKTTF LNPFDATLLG 180
  181 AVKAGVFVAQ AAGNGGPFPK TLVSYSPWIT TVAAAIDDRR YKNHLTLGNG KMLAGIGLSP 240
  241 STRPHRSYKM VSANDVLLGS SGMKYNPSDC QKPEVLNKKL VEGNILLCGY SFNFVAGSAS 300
  301 IKKVAETAKH LGAAGFVLVV ENVSPGTKFD PVPSCIPGIL ITDVSKSMDL IDYYNVTTSR 360
  361 DWMGRVKDFK AEGSIGDGLE PILHKSAPEV ALFSARGPNT KDFSFQDADL LKPDILAPGS 420
  421 LIWSAWSANG TDEANYIGEG FALISGTSMA APHIAGIAAL VKQKHPQWSP AAIKSALMTT 480
  481 STVIDRAGRP LQAQQYSETE TVTLVKATPF DYGSGHVNPS AALDPGLIFD AGYEDYIGFL 540
  541 CTTPGIDAHE IKNFTNTPCN FKMVHPSNFN TPSIAISHLV RTQTVTRRVT NVAEEEETYT 600
  601 ITSRMEPAIA IEVSPPAMTV RAGASRTFSV TLTVRSVTGA YSFGQVTLKG SRGHKVTLPV 660
  661 VAMGQRR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.522879
Match: 1xf1A
Description: Structure of C5a peptidase- a key virulence factor from Streptococcus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle