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View Structure Prediction Details

Protein: U80B1_ARATH
Organism: Arabidopsis thaliana
Length: 615 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for U80B1_ARATH.

Description E-value Query
Range
Subject
Range
gi|86440327 - gi|86440327|gb|ABC96116.1| sterol glucosyltransferase [Withania somnifera]
390.0 [0..37] [614..124]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNVFDHPL QELEGEDNGV KSEKASLLET SGSVDTTPED SGHRSSDGHR GLDHCETAPV  60
   61 GLYGDMLIND SEIQYSRSLT EKGSPAIHNL KLDRLSEQEK QKLIVELVRI QNDGTVEVID 120
  121 NGTPVSELWE FEPTKGQSTI TYEKSLTESF RSIPR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-615]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKIAILVVGT RGDVQPFLAM AKRLQEFGHR VRLATHANFR SFVRAAGVEF YPLGGDPREL  60
   61 AAYMARNKGL IPSGPSEISK QRKQLKAIIE SLLPACIEPD LETATSFRAQ AIIANPPAYG 120
  121 HVHVAEALGV PIHIFFTMPW TPTNEFPHPL ARVPQSAAYW LSYIVVDLMV WWSIRTYIND 180
  181 FRKRKLNLAP IAYFSTYHGS ISHLPTGYMW SPHVVPKPSD WGPLVDVVGY CFLNLGSKYQ 240
  241 PREEFLHWIE RGSPPVYIGF GSMPLDDPKQ TMDIILETLK DTEQRGIVDR GWGGLGNLAT 300
  301 EVPENVFLVE DCPHDWLFPQ CSAVVHHGGA GTTATGLKAG CPTTIVPFFG DQFFWGDRIY 360
  361 EKGLGPAPIP IAQLSVENLS SSIRFMLQPE VKSQVMELAK VLENEDGVAA AVDAFHRHLP 420
  421 PELPLPESSS EKKDEDDRPD LLQWFFIQIG KKCCLPCGGV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.154902
Match: 1iirA
Description: UDP-glucosyltransferase GtfB
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.65148466065976 bayes_pls_golite062009
transferase activity 1.40378926992879 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 1.18080869569902 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.727815347010453 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle