| Protein: | RL71_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 247 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL71_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
378.0 | [0..3] | [247..75] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MAEEEAKGLD YIPEIVLKKR KNRDELAFIR KKQLELGNSG KKKKKVSDIK RPEDFVHEFR 60
61 AKEVDMIRMK QRVKRPKSSP P
|
| Detection Method: |  |
| Confidence: | 4.107905 |
| Match: | PF08079.3 |
| Description: | No description for PF08079.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.490 | N/A | N/A | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.486 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.459 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.428 | N/A | N/A | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.424 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
|
Region A: Residues: [82-247] |
1 11 21 31 41 51
| | | | | |
1 PVKSDLVFII RIQGKNDMHP KTKRILNNLQ LKSVFTGVFA KATDSLFQKL LKVQPYVTYG 60
61 YPNDKSVKDL IYKKGCTIIE GNPVPLTDNN IIEQALGEHK ILGIEDLVNE IARVGDHFRE 120
121 VMRFLGPLKL NKPVADVLHR KKQVFSEGGD TGNREDKIND LISKMN
|
| Detection Method: | |
| Confidence: | 62.30103 |
| Match: | 1s1iF |
| Description: | Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H. |
Matching Structure (courtesy of the PDB): |
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