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View Structure Prediction Details

Protein: GASA7_ARATH
Organism: Arabidopsis thaliana
Length: 108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GASA7_ARATH.

Description E-value Query
Range
Subject
Range
gi|25313150, gi|... - gi|2982285|gb|AAC32128.1| GASA5-like protein [Picea mariana], pir||T51963 GASA5-like protein [import...
111.0 [0..10] [108..7]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIIVSILVL ASLLLISSSL ASATISDAFG SGAVAPAPQS KDGPALEKWC GQKCEGRCKE  60
   61 AGMKDRCLKY CGICCKDCQC VPSGTYGNKH ECACYRDKLS SKGTPKCP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 63.853872
Match: PF02704.5
Description: No description for PF02704.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.579 N/A N/A a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.521 N/A N/A a.4.6 C-terminal effector domain of the bipartite response regulators
View Download 0.470 N/A N/A f.14.1 Voltage-gated potassium channels
View Download 0.405 N/A N/A a.7.6 Ribosomal protein S20
View Download 0.391 N/A N/A a.48.3 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70


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